interface graph thumbnail
legend  pdf

structure nameMBD2 IN COMPLEX WITH METHYLATED DNA
referenceStructural Genomics Consortium (SGC)
sourceHomo sapiens
experimentX-ray (resolution=2.05, R-factor=?)
structural superfamilyDNA-binding domain;
reference complex2ky8_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRSDYR/RDYR

Estimated binding specificities ?

readout + contactlogo
# IC=6.179 IC/col=0.883 n_of_columns=7 specificity:   
A |   0  96   6   6  13   0   0
C |  96   0  16  22  64  96   0
G |   0   0  20  20   6   0  96
T |   0   0  54  48  13   0   0
scan!

home
updated Thu Jun 25 12:36:51 2026