interface graph thumbnail
legend  pdf

structure nameMBD2 IN COMPLEX WITH METHYLATED DNA
referenceStructural Genomics Consortium (SGC)
sourceHomo sapiens
experimentX-ray (resolution=2.05, R-factor=?)
structural superfamilyDNA-binding domain;
reference complex6c1t_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRSDYR/RDYR

Estimated binding specificities ?

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# IC=6.012 IC/col=0.859 n_of_columns=7 specificity:   
A |   0   0  14  57  53   0   0
C |  96   0  12  19  12   0   0
G |   0  96  51  12  12   0  96
T |   0   0  19   8  19  96   0
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updated Wed Jul 30 15:35:57 2025