interface graph thumbnail
legend  pdf

structure nameMBD2 IN COMPLEX WITH A DEOXY-OLIGONUCLEOTIDE
referenceStructural Genomics Consortium (SGC)
sourceHomo sapiens
experimentX-ray (resolution=2.30, R-factor=?)
structural superfamilyDNA-binding domain;
reference complex6c1t_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRDYKR/RDR

Estimated binding specificities ?

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# IC=6.220 IC/col=0.889 n_of_columns=7 specificity:   
A |   0   0  24  19   0   0   0
C |  96   0  24  20   0   0  20
G |   0  96  24  38  96   0  76
T |   0   0  24  19   0  96   0
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updated Tue Jan 6 01:28:13 2026