6chv_BD : 3D-footprint complex

structure name	PROTEUS VULGARIS HIGA ANTITOXIN BOUND TO DNA
reference	Schureck et al. Mol.Microbiol. 111 1449 2019
source	Proteus vulgaris
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	6chv_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6chv_B interface=21,30,32,35,36,42, kvshpgemiardledmgvsgRrfahnigvTpAtvSRllagkTaltpslsiriaaalgstpefwlrlqsnydlrqlenqidtsgivlyg > 6chv_D interface=21,30,32,35,36,42, kvshpgemiardledmgvsgRrfahnigvTpAtvSRllagkTaltpslsiriaaalgstpefwlrlqsnydlrqlenqidtsgivlygesn
interface signature	RTASRT/RTASRT

Estimated binding specificities ?

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# IC=9.057 IC/col=0.566 n_of_columns=16

specificity:

A |   8  24  24  16  96   0  96  24  24  24  24  24   0   0   0  56
C |   8  24  24  16   0  96   0  24  24  24  24  24   0   0   0   8
G |   8  24  24   8   0   0   0  24  24  24  24  24   0  96   0  16
T |  72  24  24  56   0   0   0  24  24  24  24  24  96   0  96  16

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updated Tue Sep 10 11:33:06 2024