6chv_GH : 3D-footprint complex

structure name	PROTEUS VULGARIS HIGA ANTITOXIN BOUND TO DNA
reference	Schureck et al. Mol.Microbiol. 111 1449 2019
source	Proteus vulgaris
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	6chv_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6chv_G interface=20,29,31,34,35,41, vshpgemiardledmgvsgRrfahnigvTpAtvSRllagkTaltpslsiriaaalgstpefwlrlqsnydlrqlenqidtsgivlygesne > 6chv_H interface=19,28,30,33,34,40, shpgemiardledmgvsgRrfahnigvTpAtvSRllagkTaltpslsiriaaalgstpefwlrlqsnydlrqlenqidtsgivlyg
interface signature	RTASRT/RTASRT

Estimated binding specificities ?

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# IC=9.385 IC/col=0.587 n_of_columns=16

specificity:

A |   1  24   4   4  96   0  96  24  24  24  24  24   0   0  10  73
C |   9  24  18   9   0  96   0  24  24  24  24  24   0   0  13   9
G |   9  24  15   4   0   0   0  24  24  24  24  24   0  96   9  10
T |  77  24  59  79   0   0   0  24  24  24  24  24  96   0  64   4

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updated Tue Sep 10 11:33:23 2024