6eko_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF TYPE IIP RESTRICTION ENDONUCLEASE PFOI WITH COGNATE DNA (Restriction endonuclease PfoI)
reference	Tamulaitiene et al. 'Nucleic 47 997 2019
source	Pseudomonas fluorescens
experiment	X-ray (resolution=2.28, R-factor=0.209)
multimeric complexes	6eko_AB
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6eko_A interface=100,105,108,109,188,190,191,192,238,246,256, mqkyrlyekdgspvqdfnrfvkgwldiefglkehqppkvfdtirdkyneaieavvlsgvaprtahkaalstltellfghdlakelsarldiqpigvggfRsahsQafAKnvgenfvnlmvyalacilkdnddvlvdkglpphlkkaltlsrecrikdtlreikipiegdlcvfsrsnhnaivisaatRlKEVfhigtmwalfsdvakdeyclnkwglkvesseslkdtmyvfatadmInkdgarsQgcdveretpRnliamdasffdyvfvskmgighvssdlslkygreslfhelgciidmieqkfdill
interface signature	RQAKRKEVIQR

Estimated binding specificities ?

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# IC=9.995 IC/col=1.000 n_of_columns=10

specificity:

A |   8   6   6   7   0   0   0   0  96   6
C |  76   6  70   6  96  96   0   0   0   6
G |   0  78   6   0   0   0  96  96   0  72
T |  12   6  14  83   0   0   0   0   0  12

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updated Wed Dec 18 03:35:25 2024