6en1_AB : 3D-footprint complex

structure name	STRUCTURE OF THE TN1549 TRANSPOSON INTEGRASE (AA 82-397, R225K) IN COMPLEX WITH A CIRCULAR INTERMEDIATE DNA (CI6A-DNA)
reference	Rubio-Cosials et al. Cell 173 208 2018
source	Enterococcus faecalis
experiment	X-ray (resolution=2.67, R-factor=?)
structural superfamily	DNA breaking-rejoining enzymes;
reference complex	6en1_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6en1_A interface=21,22,28,70,73,74,174,235,236,237,244,292,295, smtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidsvklsdakewalrmkekglsyktinNdkRSlkaafytaiqddcirknpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglkiselcgltdkdldfenrviivshqllrnTgvgyyidepktqsgvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgRlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsNitMtlnyyahatfdsaraemerla > 6en1_B interface=21,22,28,66,67,70,73,74,80,174,235,236,237,244,295, smtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidsvklsdakewalrmkekglsyKTinNdkRSlkaafYtaiqddcirknpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglkiselcgltdkdldfenrviivshqllrnTgvgyyidepktqsgvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgRlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsnitMtlnyyahatfdsaraemerla
interface signature	NTRNRSTAVDRNM/NTRKTNRSYTAVDRM

Estimated binding specificities ?

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# IC=22.347 IC/col=0.931 n_of_columns=24

specificity:

A |   0  24   5  24  51  90  93   0   0   1   0   0   0  96  96  96  96   4   4  82  24  84  24   1
C |  94  24   1  24  15   1   1   0   0   8   0   0  96   0   0   0   0   1   1   1  24   4  24   0
G |   0  24   7  24  15   4   1   0   0   7   0   0   0   0   0   0   0   1   1   5  24   1  24  94
T |   2  24  83  24  15   1   1  96  96  80  96  96   0   0   0   0   0  90  90   8  24   7  24   1

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updated Thu Jun 25 13:55:50 2026