| structure name | STRUCTURE OF THE TN1549 TRANSPOSON INTEGRASE (AA 82-397, R225K) IN COMPLEX WITH A CIRCULAR INTERMEDIATE DNA (CI6A-DNA) (Int protein) |
| reference | Rubio-Cosials et al. Cell 173 208 2018 |
| source | Enterococcus faecalis |
| experiment | X-ray (resolution=2.67, R-factor=0.191) |
| structural superfamily | DNA breaking-rejoining enzymes; |
| sequence family | Phage integrase family; |
| multimeric complexes | 6emz_AB 6en0_AB 6en1_AB 6en2_AB |
| redundant complexes | 6emz_B
6en0_A
 6en2_A
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | NRN |
Estimated binding specificities ?
| contact |  |
A | 3 24 3 24 58 85 85 0 0 3 0 0 C | 85 24 3 24 14 3 5 0 0 3 0 0 G | 5 24 10 24 14 3 3 0 0 14 0 0 T | 3 24 80 24 10 5 3 96 96 76 96 96scan! |
Dendrogram of similar interfaces ?
matrix formatNATA----RTKTTT--NARASA--YT----TA----ATVTDT--------RC----NT----MT L +----------6en1_A +---------2 KATA--NA--ATST--LT----------------------TTSTRGYC---------------- L ! +----------1z1b_B +-----4 HTTTKGMTST----KATTQT--QT--------RTST--RG--EA-------------------- L ! ! +------------------1xo0_B ! +-3 ------------------------------------IT----ST------------DA--EATT L ! ! +4e0g_A +-6 +------------------1 ------------------------------------IT----------------NADA--EATT L ! ! +4f43_A ! ! --------------------------FCKC--------------NT--RGSTKT---------- L --7 ! +-----------------------1flo_A ! +--5 ----------------------------------RT--ET------------------------ ! +-----------------------6gys_E ! ----------------------------------------------------------TG---- L +----------------------------2v6e_B |
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updated Wed Dec 18 03:35:57 2024