6en2_AB : 3D-footprint complex

structure name	STRUCTURE OF THE TN1549 TRANSPOSON INTEGRASE (AA 82-397, R225K) IN COMPLEX WITH A CIRCULAR INTERMEDIATE DNA (CI6B-DNA)
reference	Rubio-Cosials et al. Cell 173 208 2018
source	Enterococcus faecalis
experiment	X-ray (resolution=2.67, R-factor=?)
structural superfamily	DNA breaking-rejoining enzymes;
reference complex	6en1_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6en2_A interface=21,22,28,66,67,70,73,74,174,234,235,236,243, smtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidsvklsdakewalrmkekglsyKTinNdkRSlkaafytaiqddcirknpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglkiselcgltdkdldfenrviivshqllrnTgvgyyidepktsgvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgRlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsnitmtlnyyahatfdsaraemerl > 6en2_B interface=21,22,28,66,67,70,73,74,76,80,174,234,235,236,243, smtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidsvklsdakewalrmkekglsyKTinNdkRSlKaafYtaiqddcirknpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglkiselcgltdkdldfenrviivshqllrnTgvgyyidepktsgvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgRlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsnitmtlnyyahatfdsaraemerl
interface signature	NTRKTNRSTAVDR/NTRKTNRSKYTAVDR

Estimated binding specificities ?

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# IC=24.055 IC/col=0.925 n_of_columns=26

specificity:

A |   0  24   7  24  72  90  90   0   0   0   0   0  24   1   0  96  96  96  96   4   1  73  10  72  24   0
C |  94  24   7  24   7   1   1   0   0   0   0  96  24   1   0   0   0   0   0   1   1   9   7   7  24   0
G |   2  24   7  24  10   4   4   0   0   0   0   0  24   4   0   0   0   0   0   1   4   7   7  12  24  96
T |   0  24  75  24   7   1   1  96  96  96  96   0  24  90  96   0   0   0   0  90  90   7  72   5  24   0

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updated Sat Dec 14 11:20:41 2024