6en2_AB : 3D-footprint complex

structure name	STRUCTURE OF THE TN1549 TRANSPOSON INTEGRASE (AA 82-397, R225K) IN COMPLEX WITH A CIRCULAR INTERMEDIATE DNA (CI6B-DNA)
reference	Rubio-Cosials et al. Cell 173 208 2018
source	Enterococcus faecalis
experiment	X-ray (resolution=2.67, R-factor=?)
structural superfamily	DNA breaking-rejoining enzymes;
reference complex	6en1_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6en2_A interface=21,22,28,66,67,70,73,74,174,234,235,236,243, smtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidsvklsdakewalrmkekglsyKTinNdkRSlkaafytaiqddcirknpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglkiselcgltdkdldfenrviivshqllrnTgvgyyidepktsgvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgRlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsnitmtlnyyahatfdsaraemerl > 6en2_B interface=21,22,28,66,67,70,73,74,76,80,174,234,235,236,243, smtvcqlyakqirhrgnvkhNTklgreRlmrileqdrlgscpidsvklsdakewalrmkekglsyKTinNdkRSlKaafYtaiqddcirknpfdfqlsdvldddtepkvpltpaqeesflsfiqgdkvyqkhydaivillgtglkiselcgltdkdldfenrviivshqllrnTgvgyyidepktsgvrkipmneevyqafqrviknrkgakpfiidgyanflflkqngypmtAVDyggmfgRlvkkynksheealpktttphamrhtfctrlanagmnpkalqyimghsnitmtlnyyahatfdsaraemerl
interface signature	NTRKTNRSTAVDR/NTRKTNRSKYTAVDR

Estimated binding specificities ?

contact

# IC=24.486 IC/col=0.942 n_of_columns=26

specificity:

A |   0  24   7  24  71  93  90   0   0   0   0   0  24   1   0  96  96  96  96   1   1  76   7  71  24   0
C |  96  24   5  24   7   1   4   0   0   0   0  96  24   1   0   0   0   0   0   4   1  10   7  11  24   0
G |   0  24   7  24   9   1   1   0   0   0   0   0  24   4   0   0   0   0   0   3   1   5   5   7  24  96
T |   0  24  77  24   9   1   1  96  96  96  96   0  24  90  96   0   0   0   0  88  93   5  77   7  24   0

scan!

home
updated Tue Jan 6 02:50:05 2026