interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF CDX2-DNA(CAA)
(Homeobox protein CDX-2)
referenceMorgunova et al. Elife 7 ? 2018
sourceHomo sapiens
experimentX-ray (resolution=2.95, R-factor=0.210)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
reference complex6es3_K
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYRIQN

Estimated binding specificities ?

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# IC=2.699 IC/col=0.386 n_of_columns=7 specificity:   
A |  13  24  34  10  92  78  56
C |  56  24  20  10   2   6  13
G |  14  24  22  13   1   6  13
T |  13  24  20  63   1   6  14
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updated Tue Dec 17 03:55:38 2024