6f58_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HUMAN BRACHYURY (T) IN COMPLEX WITH DNA
reference	Burgess-Brown et al. 'To ? ? ?
source	Homo sapiens
experiment	X-ray (resolution=2.25, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6f58_A interface=30,151,152,168,172, gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpgapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvggpqrmitshcfpetqfiavTAyqneeitalkikynpFakaFldakersh > 6f58_B interface=30,151,152,168,172, gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpgapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvggpqrmitshcfpetqfiavTAyqneeitalkikynpFakaFlda
interface signature	RTAFF/RTAFF

Estimated binding specificities ?

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# IC=10.473 IC/col=0.582 n_of_columns=18

specificity:

A |   0  24  24  24   0  93  13  10   2  72  24   8   0   0  24  24  24  96
C |   0  24  24  24  96   1  56  56   0   6  24  14   0   0  24  24  24   0
G |   0  24  24  24   0   2  17  15   0   8  24  61   0  96  24  24  24   0
T |  96  24  24  24   0   0  10  15  94  10  24  13  96   0  24  24  24   0

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updated Sat Dec 14 12:04:35 2024