6f58_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HUMAN BRACHYURY (T) IN COMPLEX WITH DNA
reference	Burgess-Brown et al. 'To ? ? ?
source	Homo sapiens
experiment	X-ray (resolution=2.25, R-factor=?)
structural superfamily	p53-like transcription factors;
reference complex	6f59_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6f58_A interface=30,151,152,168,172, gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpgapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvggpqrmitshcfpetqfiavTAyqneeitalkikynpFakaFldakersh > 6f58_B interface=30,151,152,168,172, gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpgapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvggpqrmitshcfpetqfiavTAyqneeitalkikynpFakaFlda
interface signature	RTAFF/RTAFF

Estimated binding specificities ?

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# IC=9.458 IC/col=0.525 n_of_columns=18

specificity:

A |   3  24  24  24   0  96  19   5  24  88  24   3   0   0  24  24  24  92
C |   3  24  24  24  96   0  55  65  24   3  24  15   0   0  24  24  24   0
G |   2  24  24  24   0   0  11  11  24   3  24  57   0  96  24  24  24   3
T |  88  24  24  24   0   0  11  15  24   2  24  21  96   0  24  24  24   1

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updated Wed Jul 30 17:32:59 2025