6f58_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HUMAN BRACHYURY (T) IN COMPLEX WITH DNA
reference	Burgess-Brown et al. 'To ? ? ?
source	Homo sapiens
experiment	X-ray (resolution=2.25, R-factor=?)
structural superfamily	p53-like transcription factors;
reference complex	6f59_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6f58_A interface=30,151,152,168,172, gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpgapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvggpqrmitshcfpetqfiavTAyqneeitalkikynpFakaFldakersh > 6f58_B interface=30,151,152,168,172, gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpgapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvggpqrmitshcfpetqfiavTAyqneeitalkikynpFakaFlda
interface signature	RTAFF/RTAFF

Estimated binding specificities ?

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# IC=10.408 IC/col=0.578 n_of_columns=18

specificity:

A |   2  24  24  24   0  88  10   5   0  66  24   9   0   0  24  24  24  93
C |   4  24  24  24  96   2  72  66   0  10  24  13   0   0  24  24  24   3
G |   2  24  24  24   0   4   8  10   0   7  24  69   0  96  24  24  24   0
T |  88  24  24  24   0   2   6  15  96  13  24   5  96   0  24  24  24   0

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updated Thu Jun 25 14:43:56 2026