6f58_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HUMAN BRACHYURY (T) IN COMPLEX WITH DNA
reference	Burgess-Brown et al. 'To ? ? ?
source	Homo sapiens
experiment	X-ray (resolution=2.25, R-factor=?)
structural superfamily	p53-like transcription factors;
reference complex	6f59_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6f58_A interface=30,151,152,168,172, gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpgapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvggpqrmitshcfpetqfiavTAyqneeitalkikynpFakaFldakersh > 6f58_B interface=30,151,152,168,172, gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpgapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvggpqrmitshcfpetqfiavTAyqneeitalkikynpFakaFlda
interface signature	RTAFF/RTAFF

Estimated binding specificities ?

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# IC=9.794 IC/col=0.544 n_of_columns=18

specificity:

A |   0  24  24  24   0  96  20  17  24  96  24  15   0   0  24  24  24  93
C |   0  24  24  24  96   0  43  41  24   0  24   0   0   0  24  24  24   1
G |   0  24  24  24   0   0  18  18  24   0  24  59   0  96  24  24  24   2
T |  96  24  24  24   0   0  15  20  24   0  24  22  96   0  24  24  24   0

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updated Tue Jan 6 03:40:08 2026