6f59_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HUMAN BRACHYURY (T) G177D VARIANT IN COMPLEX WITH DNA
reference	Burgess-Brown et al. 'To ? ? ?
source	Homo sapiens
experiment	X-ray (resolution=2.15, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6f59_A interface=29,150,151,167,171, elrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpqapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvgdpqrmitshcfpetqfiavTAyqneeitalkikynpFakaFldakers > 6f59_B interface=30,157,158,174,177,178, gelrvgleeselwlrfkeltnemivtkngRrmfpvlkvnvsgldpnamysflldfvaadnhrwkyvngewvpggkpepqapscvyihpdspnfgahwmkapvsfskvkltnklngggqimlnslhkyeprihivrvgdpqrmitshcfpetqfiavTAyqneeitalkikynpFakAFldakers
interface signature	RTAFF/RTAFAF

Estimated binding specificities ?

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# IC=9.099 IC/col=0.506 n_of_columns=18

specificity:

A |   0  24  24  24   0  96   8  17  24  56  24  15   0   0  24  24  24  93
C |   0  24  24  24  96   0  78  53  24  17  24   7   0   0  24  24  24   0
G |   3  24  24  24   0   0   3  16  24  14  24  60   3  96  24  24  24   0
T |  93  24  24  24   0   0   7  10  24   9  24  14  93   0  24  24  24   3

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updated Sat Dec 14 12:04:54 2024