6fb8_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE I-CREI HOMING ENDONUCLEASE D75N VARIANT IN COMPLEX WITH AN ALTERED VERSION OF ITS TARGET DNA AT 5NNN REGION IN THE PRESENCE OF MAGNESIUM
reference	Molina et al. 'Sci 8 10286 2018
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=2.45, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6fb8_A interface=21,23,25,27,29,31,32,37,43,45,67,69,72,74,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravldaa > 6fb8_B interface=21,23,25,27,29,31,32,37,39,43,45,67,69,72,74,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravlda
interface signature	SIQKNSYQQTRRVNKT/SIQKNSYQSQTRRVNKT

Estimated binding specificities ?

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# IC=26.341 IC/col=1.098 n_of_columns=24

specificity:

A |   2   2  96  96  90  96   1   2   4   0   5   1  93   1   2  87   0   4   0  24   0   0   5  87
C |   2  87   0   0   2   0  93   1   2  96   5   2   1   2   5   5  96   2   0  24   0   0   2   2
G |   2   2   0   0   2   0   0   0  90   0  81   0   2   0  84   2   0  90   0  24   0   0  87   2
T |  90   5   0   0   2   0   2  93   0   0   5  93   0  93   5   2   0   0  96  24  96  96   2   5

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updated Wed Jul 30 17:34:15 2025