6fb8_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE I-CREI HOMING ENDONUCLEASE D75N VARIANT IN COMPLEX WITH AN ALTERED VERSION OF ITS TARGET DNA AT 5NNN REGION IN THE PRESENCE OF MAGNESIUM
reference	Molina et al. 'Sci 8 10286 2018
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=2.45, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6fb8_A interface=21,23,25,27,29,31,32,37,43,45,67,69,72,74,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravldaa > 6fb8_B interface=21,23,25,27,29,31,32,37,39,43,45,67,69,72,74,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravlda
interface signature	SIQKNSYQQTRRVNKT/SIQKNSYQSQTRRVNKT

Estimated binding specificities ?

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# IC=26.527 IC/col=1.105 n_of_columns=24

specificity:

A |   3   3  96  96  24  96   0   0   3   6  93   0  93   6   3   0  96   3   0   3   0   0   3  96
C |   0  87   0   0  24   0  87   0   3  81   0   3   0  81   0  93   0   0   0   6   0   0   3   0
G |   0   3   0   0  24   0   3  96   3   3   3   3   3   6  93   0   0  93   0   3   0   0  87   0
T |  93   3   0   0  24   0   6   0  87   6   0  90   0   3   0   3   0   0  96  84  96  96   3   0

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updated Tue Sep 10 13:07:57 2024