6fb8_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE I-CREI HOMING ENDONUCLEASE D75N VARIANT IN COMPLEX WITH AN ALTERED VERSION OF ITS TARGET DNA AT 5NNN REGION IN THE PRESENCE OF MAGNESIUM
reference	Molina et al. 'Sci 8 10286 2018
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=2.45, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6fb8_A interface=21,23,25,27,29,31,32,37,43,45,67,69,72,74,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravldaa > 6fb8_B interface=21,23,25,27,29,31,32,37,39,43,45,67,69,72,74,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgyvRdRgsVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravlda
interface signature	SIQKNSYQQTRRVNKT/SIQKNSYQSQTRRVNKT

Estimated binding specificities ?

readout + contact

# IC=28.058 IC/col=1.169 n_of_columns=24

specificity:

A |   0   2  96  96  87  96   0   2   2   0   0   0  93   0   2  87   0   0   0   2   0   0   2  90
C |   0  84   0   0   0   0  90   0   2  96   2   2   0   2   5   2  96   2   0  11   0   0   5   2
G |   0   2   0   0   5   0   0   0  92   0  92   1   2   1  87   5   0  94   0   2   0   0  87   2
T |  96   8   0   0   4   0   6  94   0   0   2  93   1  93   2   2   0   0  96  81  96  96   2   2

scan!

home
updated Thu Jun 25 14:45:14 2026