interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF SMAD8_9-MH1 BOUND TO THE GGCGC SITE.
referenceKaczmarska et al. 'Computational 19 ? 2021
sourceHomo sapiens
experimentX-ray (resolution=2.46, R-factor=?)
structural superfamilySMAD MH1 domain;
reference complex6fzs_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureDRQK/RQK

Estimated binding specificities ?

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# IC=8.062 IC/col=1.008 n_of_columns=8 specificity:   
A |   0   0  12   0   0  10  10   0
C |   0   0  64   0  96  10  85  96
G |  96  86  10  96   0  64   0   0
T |   0  10  10   0   0  12   1   0
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updated Tue Sep 10 13:28:21 2024