6gy3_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF C. GLUTAMICUM AMTR BOUND TO GLNA OPERATOR DNA
reference	Muller et al. 'To ? ? ?
source	Corynebacterium glutamicum
experiment	X-ray (resolution=2.68, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	6gy3_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6gy3_A interface=24,34,35,36,37,39,40, npreeildasaelftrqgfattsThqiadavgiRQASlYYhfpskteifltllkstvepstvlaedlstldagpemrlwaivasevrlllstkwnvgrlyqlpivgseefaeyhsqrealtnvfrdlateivgddpraelpfhitmsviemrrndgkipsplsadslpetaimladaslavlgaplpadrvektlelikqad > 6gy3_B interface=24,34,35,36,37,39,40, npreeildasaelftrqgfattsThqiadavgiRQASlYYhfpskteifltllkstvepstvlaedlstldagpemrlwaivasevrlllstkwnvgrlyqlpivgseefaeyhsqrealtnvfrdlateivgddpraelpfhitmsviemrrndgkipsplsadslpetaimladaslavlgaplpadrvektlelikqad
interface signature	TRQASYY/TRQASYY

Estimated binding specificities ?

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# IC=14.432 IC/col=0.802 n_of_columns=18

specificity:

A |   2   2   2   1  94   0   2  24  24  24  24   0  96   0  90   4  67   2
C |   2   4  85   2   2   0  84  24  24  24  24   0   0   0   2   9  11  84
G |  88   2   2   2   0   0   7  24  24  24  24   0   0   0   2  76   9   2
T |   4  88   7  91   0  96   3  24  24  24  24  96   0  96   2   7   9   8

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updated Tue Sep 10 13:46:27 2024