structure nameSTRUCTURE OF A YEAST CLOSED COMPLEX WITH DISTORTED DNA (CORE CCDIST)
experimentNMR
structural superfamilyCyclin-like;Zinc beta-ribbon;TATA-box binding protein-like;Rap30/74 interaction domains;"Winged helix" DNA-binding domain;Transcription factor IIA TFIIA, beta-barrel domain;Transcription factor IIA TFIIA, alpha-helical domain;
reference complex5oqj_M 5oqj_O 5oqj_Q 5oqj_R 5oqj_W 6gyk_U
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signature/NVFLFVTNVPLVT/RFKLVRTEGRR/RVLVETQNKKLSK/YINYKAW/LKDLARIVQLLLE

Estimated binding specificities ?

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# IC=3.022 IC/col=0.755 n_of_columns=4 specificity:   
A |  96  96  12  38
C |   0   0  12  19
G |   0   0  12  19
T |   0   0  60  20
scan!

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updated Wed Jul 30 18:18:39 2025