6j4r_AD : 3D-footprint complex

structure name	STRUCTURAL BASIS FOR THE TARGET DNA RECOGNITION AND BINDING BY THE MYB DOMAIN OF PHOSPHATE STARVATION RESPONSE REGULATOR 1
reference	Isupov et al. 'Febs 286 2809 2019
source	Arabidopsis thaliana
experiment	X-ray (resolution=2.80, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6j4r_A interface=3,47,48,51,52, kaRmrwtpelheafveavnslggseratpkgvlkimkvegltiyhvKShlQKyrtary > 6j4r_D interface=3,47,48,51, kaRmrwtpelheafveavnslggseratpkgvlkimkvegltiyhvKShlQkyrtar
interface signature	RKSQK/RKSQ

Estimated binding specificities ?

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# IC=5.223 IC/col=0.580 n_of_columns=9

specificity:

A |   9   5  74   8  60   6  96  13  19
C |   9  85   7   7  12   6   0  10  19
G |  11   3   8   7  12   6   0  10  38
T |  67   3   7  74  12  78   0  63  20

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updated Sat Dec 14 13:25:50 2024