interface graph thumbnail
legend  pdf

structure nameSTRUCTURAL BASIS FOR THE TARGET DNA RECOGNITION AND BINDING BY THE MYB DOMAIN OF PHOSPHATE STARVATION RESPONSE REGULATOR 1
referenceIsupov et al. 'Febs 286 2809 2019
sourceArabidopsis thaliana
experimentX-ray (resolution=2.70, R-factor=?)
structural superfamilyHomeodomain-like;
reference complex6j5b_C
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRKSQK/RKSQK

Estimated binding specificities ?

readout + contactlogo
# IC=7.484 IC/col=0.935 n_of_columns=8 specificity:   
A |   0   6  75   0  82   6  96   0
C |   0   9   6   8   6   6   0  96
G |  96   6   6   6   6   9   0   0
T |   0  75   9  82   2  75   0   0
scan!

home
updated Sat Dec 16 11:43:13 2023