6jbx_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF STREPTOCOCCUS PNEUMONIAE FABT IN COMPLEX WITH DNA
reference	Chen et al. 'Febs 593 2730 2019
source	Streptococcus pneumoniae
experiment	X-ray (resolution=2.20, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	6jbx_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6jbx_A interface=64,65,67,69,70,91, hhmdyqrineyltsifnnvlvieevnlrgsrfkdisikemhtidvigkapdvtpsqvskelmvTLgTvTTslnnlerkgyiervrseqdrRvvhlhltkkgrlihrlhkrfhkamvekiidgmseeeiavmgkgltnlyqfledlk > 6jbx_B interface=61,62,64,66,67,82,88, dyqrineyltsifnnvlvieevnlrgsrfkdisikemhtidvigkapdvtpsqvskelmvTLgTvTTslnnlerkgyiervRseqdrRvvhlhltkkgrlihrlhkrfhkamvekiidgmseeeiavmgkgltnlyqfledlk
interface signature	TLTTTR/TLTTTRR

Estimated binding specificities ?

readout + contact

# IC=10.246 IC/col=0.488 n_of_columns=21

specificity:

A |  85   2  24  24   0  24  24  20  85   0  38  24  24  24  51  24  96  24  24  96   5
C |   7   0  24  24   0  24  24  18   2  96   4  24  24  24   5  24   0  24  24   0   2
G |   2   0  24  24   0  24  24  46   4   0  54  24  24  24  25  24   0  24  24   0   2
T |   2  94  24  24  96  24  24  12   5   0   0  24  24  24  15  24   0  24  24   0  87

scan!

home
updated Thu Jun 25 16:28:52 2026