6jbx_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF STREPTOCOCCUS PNEUMONIAE FABT IN COMPLEX WITH DNA
reference	Chen et al. 'Febs 593 2730 2019
source	Streptococcus pneumoniae
experiment	X-ray (resolution=2.20, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	6jbx_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6jbx_A interface=64,65,67,69,70,91, hhmdyqrineyltsifnnvlvieevnlrgsrfkdisikemhtidvigkapdvtpsqvskelmvTLgTvTTslnnlerkgyiervrseqdrRvvhlhltkkgrlihrlhkrfhkamvekiidgmseeeiavmgkgltnlyqfledlk > 6jbx_B interface=61,62,64,66,67,82,88, dyqrineyltsifnnvlvieevnlrgsrfkdisikemhtidvigkapdvtpsqvskelmvTLgTvTTslnnlerkgyiervRseqdrRvvhlhltkkgrlihrlhkrfhkamvekiidgmseeeiavmgkgltnlyqfledlk
interface signature	TLTTTR/TLTTTRR

Estimated binding specificities ?

readout + contact

# IC=8.354 IC/col=0.398 n_of_columns=21

specificity:

A |  82   0  24  24   0  24   4  24  24  24  24  24   4  13  24  24  96  24  24  96   4
C |   6   0  24  24   0  24  21  24  24  24  24  24   8  48  24  24   0  24  24   0   8
G |   4   0  24  24   0  24   8  24  24  24  24  24   4  14  24  24   0  24  24   0   0
T |   4  96  24  24  96  24  63  24  24  24  24  24  80  21  24  24   0  24  24   0  84

scan!

home
updated Tue Jan 6 05:29:29 2026