6jgw_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE TRANSCRIPTIONAL REGULATOR CADR FROM P. PUTIDA IN COMPLEX WITH DNA
reference	Liu et al. Proc.Natl.Acad.Sci.USA 116 20398 2019
source	PSEUDOMONAS PUTIDA
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	Putative DNA-binding domain;
reference complex	6jgx_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6jgw_A interface=15,18,19,36, mkigelakatdcavEtiRYyereqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddsgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaecailqqle > 6jgw_B interface=15,18,19,22,36, mkigelakatdcavEtiRYyeReqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddsgsvnalidehiehvqaridglvalqeqlvelrrrcnaqga
interface signature	ERYY/ERYRY

Estimated binding specificities ?

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# IC=9.464 IC/col=0.498 n_of_columns=19

specificity:

A |   3  24  24   3  24   0  24   0   4  24   9   0   3  24  24  86  24  24   3
C |  90  24  24   3  24   0  24   0   3  24  12  96  13  24  24   3  24  24   3
G |   0  24  24   3  24   3  24  96   3  24  66   0  18  24  24   4  24  24  86
T |   3  24  24  87  24  93  24   0  86  24   9   0  62  24  24   3  24  24   4

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updated Thu Jun 25 16:33:09 2026