6jnn_AN : 3D-footprint complex

structure name	REF6 ZNF2-4-NAC004-MC1 COMPLEX
reference	Yao et al. 'Nat 10 2063 2019
source	Arabidopsis thaliana
experiment	X-ray (resolution=2.60, R-factor=?)
structural superfamily	beta-beta-alpha zinc fingers;
reference complex	6jnm_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6jnn_A interface=14,18,45,47,48,51,75,76,77,78,80, rnicpikgcgknfFshkYlvqhqrvhsddrplkcpwkgckmtfkWaWSrtEhirvhtgarpyvcaepdcgqtfrFVSDfSrhkrktghs > 6jnn_N interface=14,18,47,48,51,75,76,77,78,81, rnicpikgcgknfFshkYlvqhqrvhsddrplkcpwkgckmtfkwaWSrtEhirvhtgarpyvcaepdcgqtfrFVSDfsRhkrktghs
interface signature	FYWWSEFVSDS/FYWSEFVSDR

Estimated binding specificities ?

readout + contact

# IC=8.595 IC/col=0.537 n_of_columns=16

specificity:

A |  92   2  45  12  81  24  27  27  24  22   4  12   0   2   0   8
C |   1  88  16  12   4  24  25  22  24  22   4  60   0   4   0   8
G |   2   2  16  60   4  24  22  25  24  25   7  12   0  88   0   8
T |   1   4  19  12   7  24  22  22  24  27  81  12  96   2  96  72

scan!

home
updated Tue Sep 10 14:43:48 2024