| structure name | REF6 ZNF2-4-NAC004-MC3 COMPLEX (Lysine-specific demethylase REF6) |
| reference | Yao et al. 'Nat 10 2063 2019 |
| source | Arabidopsis thaliana |
| experiment | X-ray (resolution=2.05, R-factor=0.201) |
| structural superfamily | beta-beta-alpha zinc fingers; |
| sequence family | Zinc finger, C2H2 type; |
| multimeric complexes | 6jnn_AN |
| redundant complexes |  6jnl_A
6jnn_G
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | FKYWWSEFVSDSR |
Estimated binding specificities ?
readout + contact |  |
A | 38 92 0 96 24 81 0 C | 19 2 96 0 24 4 0 G | 19 1 0 0 24 7 96 T | 20 1 0 0 24 4 0scan! |
Dendrogram of similar interfaces ?
matrix format--QA--TTNA--STQAQTATSTNTAT--TTLAHGTCRG-- L +1g2f_F +----------1 --------KG--------HTHG--RGTGTT--ACNAKGRG L +-----------------3 +1tf3_A ! ! RGST--YGYC----QC--TGSTRGYT-------------- +-5 +-----------4is1_C ! ! --------------RG--DGEC--RG--RGSGDCHA---- L ! ! +--2wbs_A --6 +--------------------------2 --------------QA----TC--RG--RG--YCRT---- L ! +--7txc_E ! --NT--STNAVT--QTSTSGKG--RG-------------- L ! +------------6u9q_A +----------------4 QT--AG--KGRG--RG--DCKG------------------ L +------------7n5w_A |
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updated Fri Sep 13 22:12:38 2024