6jyw_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE TRANSCRIPTION REGULATOR CADR N81M MUTANT FROM P. PUTIDA IN COMPLEX WITH CADMIUM(II) AND DNA
reference	Liu et al. 'To ? ? ?
source	PSEUDOMONAS PUTIDA
experiment	X-ray (resolution=2.95, R-factor=?)
structural superfamily	Putative DNA-binding domain;
reference complex	6jgx_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6jyw_A interface=15,18,19,36, mkigelakatdcavEtiRYyereqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddscgsvmalidehiehvqaridglvalqeqlvelrrrcnecailqqletngavsvpetshvgrsh > 6jyw_B interface=15,18,19,36, mkigelakatdcavEtiRYyereqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddscgsvmalidehiehvqaridglvalqeqlvelrrrcnecailqqletngavsvpet
interface signature	ERYY/ERYY

Estimated binding specificities ?

readout + contact

# IC=9.762 IC/col=0.514 n_of_columns=19

specificity:

A |   4  24  15   3  24  24  24   0   0  24   0   0  24  24  24  87  18  24   3
C |  89  24  51   0  24  24  24   0   3  24   0  96  24  24  24   3  15  24   0
G |   0  24  18   1  24  24  24  96   0  24  96   0  24  24  24   3  49  24  90
T |   3  24  12  92  24  24  24   0  93  24   0   0  24  24  24   3  14  24   3

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updated Tue Sep 10 15:02:42 2024