6l6q_AB : 3D-footprint complex

structure name	STRUCTURAL BASIS OF NR4A2 HOMODIMERS BINDING TO SELECTIVE NUR- RESPONSIVE ELEMENTS
reference	Jiang et al. J.Biol.Chem. 294 19795 2019
source	HOMO SAPIENS
experiment	X-ray (resolution=2.60, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	6l6q_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6l6q_A interface=11,20,23,27,28,81,83, lcavcgdnaaCqhygvrtcEgcKgffKRtvqknakyvclankncpvdkrrrnrcqycrfqkclavgmvkevvrtdslkgrRgRlp > 6l6q_B interface=11,20,23,27,28,81,83, lcavcgdnaaCqhygvrtcEgcKgffKRtvqknakyvclankncpvdkrrrnrcqycrfqkclavgmvkevvrtdslkgrRgRlp
interface signature	CEKKRRR/CEKKRRR

Estimated binding specificities ?

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# IC=13.738 IC/col=0.859 n_of_columns=16

specificity:

A |   6  24  80   0  10   5  24   0  80  24  96   0   0   0   0  96
C |   5  24   5  96  64  12  24   0   5  24   0   0   0   0  96   0
G |   5  24   6   0  12  10  24   0   5  24   0  96  96   0   0   0
T |  80  24   5   0  10  69  24  96   6  24   0   0   0  96   0   0

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updated Tue Sep 10 16:13:42 2024