6lb3_ABGH : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF PA4674 IN COMPLEX WITH ITS OPERATOR DNA (18BP) FROM PSEUDOMONAS AERUGINOSA
reference	Zhang et al. 'To ? ? ?
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	7csw_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6lb3_A interface=43, rpihpgeilrdeflmefdispaalaralkvsaptvndivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepl > 6lb3_B interface=33,34,35,36,38,45, gmrpihpgeilrdeflmefdispaalaralkvSAPTvNdivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepl > 6lb3_G interface=21,30,31,32,35,42, pihpgeilrdeflmefdispAalaralkvSAPtvNdivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheie > 6lb3_H interface=33,35,45, gmrpihpgeilrdeflmefdispaalaralkvSaPtvndivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheieplla
interface signature	R/SAPTNR/ASAPNR/SPR

Estimated binding specificities ?

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# IC=9.805 IC/col=0.754 n_of_columns=13

specificity:

A |   0  24  96   0  13   0  24  96  24  24  13   0   0
C |   0  24   0  96  13   0  24   0  24  24  13   0   0
G |   0  24   0   0  54   0  24   0  24  24  57  96   0
T |  96  24   0   0  16  96  24   0  24  24  13   0  96

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updated Tue Sep 10 16:26:48 2024