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legend  pdf

structure namePSEUDOMONAS AERUGINOSA ANTITOXIN HIGA WITH PA2440 PROMOTER
(HTH CROC1-TYPE DOMAIN-CONTAINING PROTEIN)
referenceSong et al. Environ.Microbiol. 23 1541 2021
sourcePSEUDOMONAS AERUGINOSA PAO1
experimentX-ray (resolution=1.97, R-factor=0.201)
structural superfamilylambda repressor-like DNA-binding domains;
sequence familyHelixturnhelix;
multimeric complexes6jpi_ABCD 6lb3_ABGH 6lb3_DEF 7csy_ABCD
redundant complexes6jpi_A 6lb3_D 7csy_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  ----RTTT--AT--STRGTT----   L                               +-------6chv_D    
                                       +---------------------1 
  RT--------RG----NTETRTYA   L       +-2                     +-------7f9h_B    
                                     ! ! 
  ------TTQAQTSTEAQT------   L     +-3 +-----------------------------1rpe_R    
                                   ! ! 
  --QTET--QTSG------NA----   L   +-4 +-----------------------------3bdn_A    
                                 ! ! 
  --QA--TAKGKT--IG------YT   L --5 +-----------------------------4pu3_C    
                                 ! 
  ------SCQCAGRCSCKT------   L   +-----------------------------6lty_B    
                               

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updated Wed Dec 18 08:25:45 2024