6lb3_DEF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF PA4674 IN COMPLEX WITH ITS OPERATOR DNA (18BP) FROM PSEUDOMONAS AERUGINOSA
reference	Zhang et al. 'To ? ? ?
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	7csw_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6lb3_D interface=23,32,33,34,37,44, mrpihpgeilrdeflmefdispAalaralkvSAPtvNdivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepl > 6lb3_E interface=32,33,34,37,44, mrpihpgeilrdeflmefdispaalaralkvSAPtvNdivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheie > 6lb3_F interface=44, mrpihpgeilrdeflmefdispaalaralkvsaptvndivreqRgisadmairlgryfdtsaqfwmnlqseyslatayaangkqieheiepll
interface signature	ASAPNR/SAPNR/R

Estimated binding specificities ?

readout + contact

# IC=6.080 IC/col=0.608 n_of_columns=10

specificity:

A |   0  24  78   6   0   6  78  24  24   6
C |   0  24   6  78   0   6   6  24  24  78
G |   0  24   6   6  96   6   6  24  24   6
T |  96  24   6   6   0  78   6  24  24   6

scan!

home
updated Sat Dec 16 13:48:26 2023