6lbi_GH : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF FOXO1-DBD HOMODIMER BOUND TO A PALINDROMIC DNA SEQUENCE
reference	Chen et al. 'Nucleic 49 3573 2021
source	HOMO SAPIENS
experiment	X-ray (resolution=3.07, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	3co6_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6lbi_G interface=54,55,57,58,61, nawgnlsyadlitkaiessaekrltlsqiyewmvksvpyfkdkgdsnssagwkNSiRHnlSlhskfirvqnegtgksswwmln > 6lbi_H interface=48,49,51,52,55,56, nawgsyadlitkaiessaekrltlsqiyewmvksvpyfkdkgdagwkNSiRHnlSLhskfirvqneksswwmln
interface signature	NSRHS/NSRHSL

Estimated binding specificities ?

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# IC=10.867 IC/col=0.906 n_of_columns=12

specificity:

A |   0  87  96  61  24  93   2   5   5   0   2  87
C |   0   2   0  11  24   3   2   2  14   0   5   5
G |   0   5   0  16  24   0   2  87  11   0   2   2
T |  96   2   0   8  24   0  90   2  66  96  87   2

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updated Tue Sep 10 16:27:18 2024