6lew_A : 3D-footprint complex

structure name	RVD HA SPECIFICALLY CONTACTS 5MC THROUGH VAN DER WAALS INTERACTIONS (TAL effector)
reference	Liu et al. 'To ? ? ?
source	Xanthomonas campestris pv. armoraciae
experiment	X-ray (resolution=2.48, R-factor=0.233)
structural superfamily	Thiolase-like;
sequence family	Xanthomonas avirulence protein, Avr/PthA;
redundant complexes	6jw3 6jw4
reference complex	4osh_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6lew_A interface=33,68,102,136,238,272,297,331,399, garalealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashAggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrgltpqqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpaltndhlvalaclggrpaldavkkleh
interface signature	RDDDANDND

Estimated binding specificities ?

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# IC=8.423 IC/col=0.702 n_of_columns=12

specificity:

A |   0  24   0   0   6  24  24  54   0   0   0  54
C |   0  24  78   0  72  24  24  18   0   0   0  18
G |  96  24   6  96   6  24  24  12  96  96  96  12
T |   0  24  12   0  12  24  24  12   0   0   0  12

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updated Fri Jan 9 08:14:44 2026