6lew_A : 3D-footprint complex

structure name	RVD HA SPECIFICALLY CONTACTS 5MC THROUGH VAN DER WAALS INTERACTIONS (TAL effector)
reference	Liu et al. 'To ? ? ?
source	Xanthomonas campestris pv. armoraciae
experiment	X-ray (resolution=2.48, R-factor=0.233)
structural superfamily	Thiolase-like;
sequence family	Xanthomonas avirulence protein, Avr/PthA;
redundant complexes	6jw3 6jw4
reference complex	4osh_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6lew_A interface=33,68,102,136,238,272,297,331,399, garalealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashAggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrgltpqqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasnNggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpaltndhlvalaclggrpaldavkkleh
interface signature	RDDDANDND

Estimated binding specificities ?

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# IC=8.499 IC/col=0.708 n_of_columns=12

specificity:

A |  13   0   0   0  16  24  24  13   0  14  24   0
C |  16  96  96  96  13  24  24   6  96   0  24  96
G |  13   0   0   0  13  24  24  68   0  82  24   0
T |  54   0   0   0  54  24  24   9   0   0  24   0

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updated Sun Jun 28 17:41:31 2026