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legend  pdf

structure nameC-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA WITH 16BP METHYLATED OLIGONUCLEOTIDE CONTAINING CONSENSUS RECOGNITION SEQUENCE-C2221 CRYSTAL FORM
referenceHorton et al. 'Nucleic 47 1774 2019
sourceHomo sapiens
experimentX-ray (resolution=1.93, R-factor=?)
structural superfamilyLeucine zipper domain;
reference complex6mg1_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNAVSR/RNAVSR

Estimated binding specificities ?

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# IC=10.420 IC/col=1.042 n_of_columns=10 specificity:   
A |  63   0   0   8   0   0   0  96  96   8
C |   8   0   0  19  96   0  96   0   0  19
G |  17   0   0  61   0  96   0   0   0   8
T |   8  96  96   8   0   0   0   0   0  61
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updated Tue Sep 10 16:55:48 2024