6ml2_A : 3D-footprint complex

structure name	ZBTB24 ZINC FINGERS 4-8 WITH 19+1MER DNA OLIGONUCLEOTIDE (SEQUENCE 1) (Zinc finger and BTB domain-containing protein 24)
reference	Horton et al. 'Nucleic 47 8388 2019
source	Mus musculus
experiment	X-ray (resolution=1.87, R-factor=0.252)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6ml2_A interface=43,44,47,68,69,71,72,97,99,100,102,103,125,127,128, sksftcdqcgkyfsqkrqlkshyrvhtslpecshchrkfmdvSQlkKhlrthtgekpftceicgksfTAkSSlqthirihrgekpyscsicgkcfsDsSAkRRhcilhtgkkpfscpecglqfaRlDNlkahlkihske
interface signature	SQKTASSDSARRRDN

Estimated binding specificities ?

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# IC=10.183 IC/col=1.018 n_of_columns=10

specificity:

A |  19  96   0   0   0   0   0  24  19   0
C |  38   0   0   0   0  96  96  24   1   0
G |  20   0  96  96   0   0   0  24  76  96
T |  19   0   0   0  96   0   0  24   0   0

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updated Tue Dec 17 05:56:00 2024