6ml5_A : 3D-footprint complex

structure name	ZBTB24 ZINC FINGERS 4-8 WITH 19+1MER DNA OLIGONUCLEOTIDE (SEQUENCE 4) (Zinc finger and BTB domain-containing protein 24)
reference	Horton et al. 'Nucleic 47 8388 2019
source	Mus musculus
experiment	X-ray (resolution=1.65, R-factor=0.227)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	6ml4_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6ml5_A interface=44,46,47,50,71,72,74,75,100,101,102,103,105,106,128,130,131, gsksftcdqcgkyfsqkrqlkshyrvhtghslpecshchrkfmDvSQlkKhlrthtgekpftceicgksfTAkSSlqthirihrgekpyscsicgkcfsDSSAkRRhcilhtgkkpfscpecglqfaRlDNlkahlkihske
interface signature	DSQKTASSDSSARRRDN

Estimated binding specificities ?

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# IC=14.761 IC/col=1.135 n_of_columns=13

specificity:

A |   0   0   0  10   0  85   0   0  96   0   0   0  12
C |  96   0   0  66  86   1   0   0   0  96  96   0  10
G |   0  96   0  10   0  10  96  96   0   0   0   0  64
T |   0   0  96  10  10   0   0   0   0   0   0  96  10

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updated Fri Sep 13 01:06:11 2024