interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF H.PYLORI NIKR IN COMPLEX WITH DNA
(Nickel-responsive regulator)
referencede Serrano et al. 'To ? ? ?
sourceHelicobacter pylori (strain ATCC 700392 / 26695) / Helicobacter pylori (strain ATCC 700392 / 26695)
experimentX-ray (resolution=2.80, R-factor=0.209)
structural superfamilyACT-like;Ribbon-helix-helix;
sequence familyNikR C terminal nickel binding domain; Ribbonhelixhelix protein, copG family;
multimeric complexes6mrj_ABCD
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRSSR

Estimated binding specificities ?

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# IC=4.915 IC/col=0.702 n_of_columns=7 specificity:   
A |   0   9  73  24   7  96   7
C |   0   7   9  24   7   0   9
G |   0   7   7  24   9   0   7
T |  96  73   7  24  73   0  73
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updated Fri Sep 13 22:38:00 2024