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structure nameSTRUCTURE OF TBP-HOOGSTEEN CONTAINING DNA COMPLEX
(TATA-box-binding protein 1)
referenceSchumacher et al. Angew.Chem.Int.Ed.Engl. 58 12010 2019
sourceArabidopsis thaliana
experimentX-ray (resolution=2.75, R-factor=0.235)
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
multimeric complexes1vol_AB
reference complex1qna_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFLFVTNVFPLFVT

Estimated binding specificities ?

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# IC=8.472 IC/col=1.059 n_of_columns=8 specificity:   
A |   0  96   0  96  96  54   0  13
C |   0   0   0   0   0  16  96  13
G |   0   0   0   0   0  13   0  57
T |  96   0  96   0   0  13   0  13
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updated Fri Sep 13 01:09:37 2024