6nsr_AB : 3D-footprint complex

structure name	TETR FAMILY TRANSCRIPTIONAL REGULATOR CIFR C99T-C181R CYSTEINE MUTANT COMPLEXED WITH 26BP DOUBLE-STRAND OPERATOR DNA AND APO-CIFR C99T- C181R
reference	Madden et al. 'To ? ? ?
source	Pseudomonas aeruginosa
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	Tetracyclin repressor-like, C-terminal domain;Homeodomain-like;
reference complex	6nsn_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6nsr_A interface=2,29,39,40,41,42,44, gRprafdrdtalqramdvfwvrgyegasLaalteameiRPPSlYaafgskeglfrealahylgqhgryrrdvldgapsaregvaellretvarftsdefprgclvvlaaltgtpeseavrdalsaergesirlfrermrrgiadgdlaadtdmeelatfyatvlfglsvqakdrvprerllavveralrawp > 6nsr_B interface=1,28,39,40,41,43, RprafdrdtalqramdvfwvrgyegasLaalteameirPPSlYaafgskeglfrealahylgqhgryrrdvldgapsaregvaellretvarftsdefprgclvvlaaltgtpeseavrdalsaergesirlfrermrrgiadgdlaadtdmeelatfyatvlfglsvqakdrvprerllavveralrawp
interface signature	RLRPPSY/RLPPSY

Estimated binding specificities ?

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# IC=16.118 IC/col=0.768 n_of_columns=21

specificity:

A |  68   0   4   9  92   6  96   0   9  24  24  24  24  24  96   0  96   0  24  96  96
C |   9   0   4   9   0   4   0   0   9  24  24  24  24  24   0   0   0  96  24   0   0
G |   9   0   4  10   0   4   0  96  13  24  24  24  24  24   0   0   0   0  24   0   0
T |  10  96  84  68   4  82   0   0  65  24  24  24  24  24   0  96   0   0  24   0   0

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updated Tue Sep 10 17:27:13 2024