6o6p_AB : 3D-footprint complex

structure name	STRUCTURE OF THE REGULATOR FASR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH DNA
reference	Trajtenberg et al. 'Nat 11 3703 2020
source	Mycobacterium tuberculosis
experiment	X-ray (resolution=3.85, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6o6p_A interface=36,37,38,41, rderrgqllvvasdvfvdrgyhaagmdeiadragvSKPvlYqhfssklelylavlhrhvenlvsgvhqalstttdnrqrlhvavqaffdfiehdsqgyrlifendfvtepevaaqvrvatescidavfalisadsgldphrarmiavglvgmsvdcarywldadkpisksdavegtvqfawgglshvp > 6o6p_B interface=35,36,37,40, derrgqllvvasdvfvdrgyhaagmdeiadragvSKPvlYqhfssklelylavlhrhvenlvsgvhqalstttdnrqrlhvavqaffdfiehdsqgyrlifendfvtepevaaqvrvatescidavfalisadsgldphrarmiavglvgmsvdcarywldadkpisksdavegtvqfawgglshvp
interface signature	SKPY/SKPY

Estimated binding specificities ?

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# IC=6.777 IC/col=0.521 n_of_columns=13

specificity:

A |  17  10  96   0  24  24  24  24  24  24   0   0  18
C |  17   0   0  96  24  24  24  24  24  24  96   0  61
G |  54   8   0   0  24  24  24  24  24  24   0   0  17
T |   8  78   0   0  24  24  24  24  24  24   0  96   0

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updated Sat Dec 14 17:00:20 2024