interface graph thumbnail
legend  pdf

structure nameHUMAN TCF4 C-TERMINAL BHLH DOMAIN IN COMPLEX WITH 13-BP OLIGONUCLEOTIDE CONTAINING E-BOX SEQUENCE
referenceHorton et al. 'Nucleic 47 8375 2019
sourceHomo sapiens
experimentX-ray (resolution=1.49, R-factor=?)
structural superfamilyHLH, helix-loop-helix DNA-binding domain;
reference complex6od3_F
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNNERR/NNRERR

Estimated binding specificities ?

readout + contactlogo
# IC=6.915 IC/col=0.864 n_of_columns=8 specificity:   
A |  12  24  12  96   0   0   0   0
C |  12  24  60   0  96   0   0   0
G |  12  24  12   0   0  96  12  96
T |  60  24  12   0   0   0  84   0
scan!

home
updated Tue Sep 10 17:42:06 2024