6oen_BCH : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF MOUSE RAG1/2 PRC COMPLEX (DNA1)
source	MUS MUSCULUS / HOMO SAPIENS
experiment	NMR
structural superfamily	Galactose oxidase, central domain;
reference complex	6cg0_D 6cij_D 6oem_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6oen_B interface= mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdikqnhlklkpaifskdscylpplrypatcsykgkhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnkqamseafyfytlrcs > 6oen_C interface=8,84,88,110,578,579, hllsltrRaqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarnehrqadeleaimqgrgsglqpavclairvntflsCsqyHkmyrtvkaitgrqifqplhalRnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsiggnqsgnklfrrfrkmnaRQskcyemedvlkhhwlytskylqkfmnahna > 6oen_H interface=3,6,7,22,26, afFlfCSeyrpkikgehpglsIgdvAkklgemwnntaaddkqpyekkaaklkeky
interface signature	/RCHRRQ/FCSIA

Estimated binding specificities ?

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# IC=9.182 IC/col=0.540 n_of_columns=17

specificity:

A |   0   1  12  24  93   2  24  24  24  24  24  14  81  24   2  62   0
C |   0   0  14  24   2   0  24  24  24  24  24   8   0  24  90  14  96
G |  96   2   8  24   1  92  24  24  24  24  24  12  14  24   2   8   0
T |   0  93  62  24   0   2  24  24  24  24  24  62   1  24   2  12   0

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updated Sat Dec 16 15:06:06 2023