6oen_BCH : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF MOUSE RAG1/2 PRC COMPLEX (DNA1)
source	MUS MUSCULUS / HOMO SAPIENS
experiment	NMR
structural superfamily	Galactose oxidase, central domain;
reference complex	6cg0_A 6cg0_D 6cij_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6oen_B interface= mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdikqnhlklkpaifskdscylpplrypatcsykgkhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnkqamseafyfytlrcs > 6oen_C interface=8,84,88,110,578,579, hllsltrRaqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarnehrqadeleaimqgrgsglqpavclairvntflsCsqyHkmyrtvkaitgrqifqplhalRnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsiggnqsgnklfrrfrkmnaRQskcyemedvlkhhwlytskylqkfmnahna > 6oen_H interface=3,6,7,22,26, afFlfCSeyrpkikgehpglsIgdvAkklgemwnntaaddkqpyekkaaklkeky
interface signature	/RCHRRQ/FCSIA

Estimated binding specificities ?

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# IC=8.321 IC/col=0.489 n_of_columns=17

specificity:

A |   5  24   1  24   4  24  24  24  24  24  24   0   0  12  58  96   0
C |   0  24   0  24   8  24  24  24  24  24  24  92   5   8  16   0  96
G |  87  24  91  24   9  24  24  24  24  24  24   0   0  16  16   0   0
T |   4  24   4  24  75  24  24  24  24  24  24   4  91  60   6   0   0

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updated Tue Jan 6 09:29:42 2026