6oen_BCH : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF MOUSE RAG1/2 PRC COMPLEX (DNA1)
source	MUS MUSCULUS / HOMO SAPIENS
experiment	NMR
structural superfamily	Galactose oxidase, central domain;
reference complex	6cg0_A 6cg0_D 6cij_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6oen_B interface= mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdikqnhlklkpaifskdscylpplrypatcsykgkhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnkqamseafyfytlrcs > 6oen_C interface=8,84,88,110,578,579, hllsltrRaqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarnehrqadeleaimqgrgsglqpavclairvntflsCsqyHkmyrtvkaitgrqifqplhalRnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsiggnqsgnklfrrfrkmnaRQskcyemedvlkhhwlytskylqkfmnahna > 6oen_H interface=3,6,7,22,26, afFlfCSeyrpkikgehpglsIgdvAkklgemwnntaaddkqpyekkaaklkeky
interface signature	/RCHRRQ/FCSIA

Estimated binding specificities ?

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# IC=9.273 IC/col=0.545 n_of_columns=17

specificity:

A |   0   0  11  24  94   2  24  24  24  24  24  14  81  24   0  57   0
C |   0   0  14  24   2   1  24  24  24  24  24  15   1  24  96  14  93
G |  96   0  14  24   0  93  24  24  24  24  24  11  14  24   0  14   1
T |   0  96  57  24   0   0  24  24  24  24  24  56   0  24   0  11   2

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updated Thu Jun 25 20:19:31 2026