6oeo_CD : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF MOUSE RAG1/2 NFC COMPLEX (DNA1)
source	MUS MUSCULUS
experiment	NMR
structural superfamily	Galactose oxidase, central domain;
reference complex	6cg0_D 6oem_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6oeo_C interface=51,329,452,454,455,456,458, rqhllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlKpIMRmNgnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna > 6oeo_D interface= mslqmvtvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdiKqnhlklkpaifskdscylpplrypatcsykgkhqyiihggktpnnelsdkiyimsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgDnkqamseafyfytlrcs
interface signature	NSKIMRN/KD

Estimated binding specificities ?

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# IC=4.434 IC/col=0.171 n_of_columns=26

specificity:

A |  13  16  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0   0
C |  54  13  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0   0
G |  16  13  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  96   0  96
T |  13  54  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0  96   0

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updated Tue Sep 10 17:45:37 2024