6oep_AC : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF MOUSE RAG1/2 12RSS-NFC/23RSS-PRC COMPLEX (DNA1)
source	MUS MUSCULUS
experiment	NMR
structural superfamily	Galactose oxidase, central domain;
reference complex	6cg0_A 6cg0_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6oep_A interface=43,317,442,443,444,446, rraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpIMRmNgnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna > 6oep_C interface=8,12,88,107,110,217,581,582, hllsltrRaqkHrlrelkiqvkefadkeeggdvkavcltlfllalrarnehrqadeleaimqgrgsglqpavclairvntflscsqyHkmyrtvkaitgrqifqplHalRnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgSgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasnqsgnklfrrfrkmnaRQskcyemedvlkhhwlytskylqkfmnahna
interface signature	NSIMRN/RHHHRSRQ

Estimated binding specificities ?

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# IC=10.537 IC/col=0.458 n_of_columns=23

specificity:

A |   0  96   5  24  13   8  24  24  21  90  24  24  24  24  24  24  24  24  24  96   0  90  93
C |  96   0  79  24  21   5  24  24   9   1  24  24  24  24  24  24  24  24  24   0  96   4   1
G |   0   0   5  24  53   5  24  24  11   4  24  24  24  24  24  24  24  24  24   0   0   1   1
T |   0   0   7  24   9  78  24  24  55   1  24  24  24  24  24  24  24  24  24   0   0   1   1

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updated Tue Jan 6 09:32:48 2026