6oeq_AC : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF MOUSE RAG1/2 12RSS-PRC/23RSS-NFC COMPLEX (DNA1)
source	MUS MUSCULUS
experiment	NMR
structural superfamily	Galactose oxidase, central domain;
reference complex	6cg0_A 6cg0_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6oeq_A interface=3,7,79,102,105,210,575,576, trRaqkHrlrelkiqvkefadkeeggdvkavcltlfllalrarnehrqadeleaimqgrgsglqpavclairvntflsCsqyhkmyrtvkaitgrqifqplHalRnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekHgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawanqsgnklfrrfrkmnaRQskcyemedvlkhhwlytskylqkfmnahna > 6oeq_C interface=51,448,450,451,452,454,456, rqhllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlKpIMRmNgNfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna
interface signature	RHCHRHRQ/NKIMRNN

Estimated binding specificities ?

contact

# IC=14.157 IC/col=0.416 n_of_columns=34

specificity:

A |   0  96   0  86   7   9  13  24  24  24  12  96  24  24  24  24  24  24  24  24  24  24  24  24  86  24  24  24  24  24  96   0  96  96
C |  96   0  96   3  12   9   6  24  24  24  58   0  24  24  24  24  24  24  24  24  24  24  24  24   4  24  24  24  24  24   0  96   0   0
G |   0   0   0   3  65   7  68  24  24  24  12   0  24  24  24  24  24  24  24  24  24  24  24  24   3  24  24  24  24  24   0   0   0   0
T |   0   0   0   4  12  71   9  24  24  24  14   0  24  24  24  24  24  24  24  24  24  24  24  24   3  24  24  24  24  24   0   0   0   0

scan!

home
updated Tue Jan 6 09:33:53 2026