6oeq_AC : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF MOUSE RAG1/2 12RSS-PRC/23RSS-NFC COMPLEX (DNA1)
source	MUS MUSCULUS
experiment	NMR
structural superfamily	Galactose oxidase, central domain;
reference complex	6cg0_D 6oem_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6oeq_A interface=3,7,79,102,105,210,575,576, trRaqkHrlrelkiqvkefadkeeggdvkavcltlfllalrarnehrqadeleaimqgrgsglqpavclairvntflsCsqyhkmyrtvkaitgrqifqplHalRnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekHgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawanqsgnklfrrfrkmnaRQskcyemedvlkhhwlytskylqkfmnahna > 6oeq_C interface=51,448,450,451,452,454,456, rqhllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlKpIMRmNgNfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna
interface signature	RHCHRHRQ/NKIMRNN

Estimated binding specificities ?

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# IC=13.457 IC/col=0.396 n_of_columns=34

specificity:

A |   0   0   0   0  24  24  24  24  24   5  24  24  24  24  24  24  24  24  24  24  24  24   0  15  24  24  24  16  24  10   0   0   0   0
C |   0   0   0   0  24  24  24  24  24   5  24  24  24  24  24  24  24  24  24  24  24  24   0  15  24  24  24  55  24  60   0   0   0   0
G |   0   0  96   0  24  24  24  24  24   6  24  24  24  24  24  24  24  24  24  24  24  24   0  51  24  24  24  15  24  15   0  96   0  96
T |  96  96   0  96  24  24  24  24  24  80  24  24  24  24  24  24  24  24  24  24  24  24  96  15  24  24  24  10  24  11  96   0  96   0

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updated Sat Dec 16 15:09:20 2023