6opm_ABCD : 3D-footprint complex

structure name	CASPOSASE BOUND TO INTEGRATION PRODUCT
reference	Hickman et al. Elife 9 ? 2020
source	METHANOSARCINA MAZEI
experiment	X-ray (resolution=3.10, R-factor=?)
reference complex	6opm_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6opm_A interface=306,312, mkllllnghginmhvdgaklhikdgrfstteepqeyvfspkrididgiiiygksgnltleairwlikhnvqvsildwngkllttmlppestnlrtkfaqyhafedkearleiakkfieakfykskavldflsqrypeinfdildgltklkdvkstreilgvegtlagkywiefskavpkeydfsnridqfrramgsgdmintmlnygyslleaeclkainsvgldthvgflhemapsknslaydlqepfrfivdlavisliesgameskdfirtenynlrlkptgarkivnefsntlnkkvsyqgKestwsYviflkvrelahyltskkekldftkpeyei > 6opm_B interface=156,190,191,192,194,237, mkllllnghginmhvdgaklhikdgrfstteepqeyvfspkrididgiiiygksgnltleairwlikhnvqvsildwngkllttmlppestnlrtkfaqyhafedkearleiakkfieakfykskavldflsqrypeinfdildgltklkdvkstReilgvegtlagkywiefskavpkeydfsnridqFRRaMgsgdmintmlnygyslleaeclkainsvgldthvgflhemapSknslaydlqepfrfivdlavisliesgameskdfirtenynlrlkptgarkivnefsntlnkkvsyqgkestwsyviflkvrelahyltskkekldftkpeyeieridsydirqkil > 6opm_C interface=306,312, mkllllnghginmhvdgaklhikdgrfstteepqeyvfspkrididgiiiygksgnltleairwlikhnvqvsildwngkllttmlppestnlrtkfaqyhafedkearleiakkfieakfykskavldflsqrypeinfdildgltklkdvkstreilgvegtlagkywiefskavpkeydfsnridqfrramgsgdmintmlnygyslleaeclkainsvgldthvgflhemapsknslaydlqepfrfivdlavisliesgameskdfirtenynlrlkptgarkivnefsntlnkkvsyqgKestwsYviflkvrelahyltskkekldftkpeyeieridsydirqkilsisyv > 6opm_D interface=156,190,191,192,194,237, mkllllnghginmhvdgaklhikdgrfstteepqeyvfspkrididgiiiygksgnltleairwlikhnvqvsildwngkllttmlppestnlrtkfaqyhafedkearleiakkfieakfykskavldflsqrypeinfdildgltklkdvkstReilgvegtlagkywiefskavpkeydfsnridqFRRaMgsgdmintmlnygyslleaeclkainsvgldthvgflhemapSknslaydlqepfrfivdlavisliesgameskdfirtenynlrlkptgarkivnefsntlnkkvsyqgkestwsyviflkvrelahyltskkekldftkpeyei
interface signature	KY/RFRRMS/KY/RFRRMS

Estimated binding specificities ?

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# IC=6.313 IC/col=0.451 n_of_columns=14

specificity:

A |   3  10   0  93  19  23  22  32  24  28   5   0  11  14
C |  86  14  95   1  26  26  18  23  24  22  14   0  57   8
G |   0  62   1   2  26  21  20  18  24  27  14  96  16  68
T |   7  10   0   0  25  26  36  23  24  19  63   0  12   6

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updated Sat Dec 16 15:20:45 2023