6p0s_ABE : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF TERNARY DNA COMPLEX "FX2" CONTAINING E. COLI FIS AND PHAGE LAMBDA XIS
reference	Hancock et al. 'Nucleic 47 8874 2019
source	ESCHERICHIA COLI / ESCHERICHIA PHAGE LAMBDA
experiment	X-ray (resolution=2.70, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6p0s_A interface=69,70,72,74, sdvltvstqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgTlRkklkkygmn > 6p0s_B interface=59,68,69,71,73, dvltvstqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn > 6p0s_E interface=17,19,20,22,23,26,39, myltlqewnarqrrprSlETvRRwvResrifpppvkdgReylfhesavkvdl
interface signature	NRTR/TNRTR/SETRRRR

Estimated binding specificities ?

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# IC=10.650 IC/col=0.666 n_of_columns=16

specificity:

A |   0   0  24  24   0  84  24  24  24  80  92   0  64  12  72   0
C |   0   0  24  24   4   4  24  24  24   4   0  96   8   8   8  96
G |   0  96  24  24   0   4  24  24  24   4   4   0  20  64  12   0
T |  96   0  24  24  92   4  24  24  24   8   0   0   4  12   4   0

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updated Sat Dec 14 17:41:35 2024