6p0t_ABE : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF TERNARY DNA COMPLEX "FX(1-2)-1XIS" CONTAINING E. COLI FIS AND PHAGE LAMBDA XIS
reference	Hancock et al. 'Nucleic 47 8874 2019
source	ESCHERICHIA COLI / ESCHERICHIA PHAGE LAMBDA
experiment	X-ray (resolution=3.60, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6p0t_A interface=71,72,74,76, sdvltvstvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgTlRkklkkygmn > 6p0t_B interface=60,69,70,74, sdvltvstqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn > 6p0t_E interface=17,19,20,22,23,26,39, myltlqewnarqrrprSlETvRRwvResrifpppvkdgReylfhesavkvdl
interface signature	NRTR/TNRR/SETRRRR

Estimated binding specificities ?

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# IC=15.011 IC/col=0.751 n_of_columns=20

specificity:

A |   4  24   4  82   0   0   4   4   0   4  24  24  24  24  96  84  24  96   0  96
C |   4  24   4   6   0   0  82   6   0   6  24  24  24  24   0   4  24   0  96   0
G |   6  24   4   4  96   0   6   4  96   4  24  24  24  24   0   4  24   0   0   0
T |  82  24  84   4   0  96   4  82   0  82  24  24  24  24   0   4  24   0   0   0

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updated Sat Dec 14 17:41:49 2024