6ppr_AB : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF ADNA(D934A)-ADNB(D1014A) IN COMPLEX WITH AMPPNP AND DNA
source	MYCOBACTERIUM SMEGMATIS
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6ppr_A interface=605,606,621,632,719,741,742, gvvrllgpgtgkssllvdtavqhilltgsarlrtaaraaitarltvhsyafavlrlsaeqdgiirellagdgwpeqlwpalttagfatelrdlmarctergvdpialqrlgrpewlaagrfaqayeqilgaaelvgaaleallldternriklllvddaqhldpqaarlvralaltviagdpdqshpaitltqsyrcapeiasaitglgqwtgnpqregtvtvrlaasthaegtmiadalrrahlvdgipwsqmavivrsvprvgtalaraltaagvpvqddvpvgrqpaaaalltvldvtatghldadsavalltgpigrvdpvtlrqlrralrradgsqpprdfgdllvdaierepkglsaehartlrrlravltaarrdprytlwqawhasglqrrwlaaserggsvgaqadrdldavttlfdvadqyvlrglvdhvavavlsvhgalagewdfvviagvqeglwpnmiprggvlgtqhlvdvllvaeerrllmaamgrartrvmitavdllpspfcaeisawatepplvaprvlapsalvgrlravvcapdaracaaaqlarlaaagvpgadpsqwhamtsltteeplwsepghvvtlspSTlqmltdcplrwlleRhggddgrdvrStvgslvhalvsepgktesqlvnelekvwddlpydakwysdnelarhramletftrwredtrrqltevateipvegivvepgvrvrgRldrlerdeagrlvvvalktgkSPvtkddaqnhaqlamyqlavaaglgdepgggklvylgkagatereqdpltpdkraewletvgeaaaatagprfvarvnngcancpvrsscpaq > 6ppr_B interface=58,60,90,112,218,289,290,377,591,613, lglfpptdeqaaviaappgplvviagagagktetmaarvvwlvangfatpsqvlgltFtRkaagqllrrvrtrlarlagagesatvstyHafagtllrehglllpvepdtrLlsetelwqlaydvvcahpghldtektpaavtamvlrlsgalaehlvdtdqlrdthvelerlvhtlpagppsqwllrmlatqtertelvplidalhqrmraekvmdFgmqmaaaarlaarfpqvgeqlrqrfrvvlldeyqdtghaqrialsslfgggaddglaltavgdpiqsiygWRgasatnlprfttdfpysdgtpaptlelrtswrnppstlhvanavseearalrprircallnnvaaerdwvadhlarayhgaaavlvRrnadaapmaealtargvpvevvgllavpevadlvamlrliadptagsavmriltgprwrfgardiaalwrraveldgtadivaqaapdadtacvadaicdpgdaeryspagyerivalgreltmlrahlghplpelvaevrrvlgldaearaarpvaagwagtenldrfsdlvsdfaggasvsallayldaavevenglapaeltvrvqiltvHaakglewqvvavphlsarvfpSttqartwltdasdlppllrgdrgvpvldtsdiydrkilsdkisdhkksldqrrvdeerrllyvaitraedtlllsghhwgateskprgpseflcelktileeeiehwplrdqvvealwhvhrgaqlvaaamgwaadvdallaererp
interface signature	STRSRSP/FRHLFWRRHS

Estimated binding specificities ?

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# IC=9.055 IC/col=0.292 n_of_columns=31

specificity:

A |   7   2  24  24  14  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  21  24  24  24  24   0   0   7   0   0   0
C |   7   2  24  24  16  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  21  24  24  24  24   0   0   8   0   0   0
G |   7   4  24  24  14  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  21  24  24  24  24   0   0   7  96   0   0
T |  75  88  24  24  52  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  33  24  24  24  24  96  96  74   0  96  96

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updated Sat Dec 14 18:12:10 2024