interface graph thumbnail
legend  pdf

structure nameTHE COMPLEX STRUCTURE OF HSROSR-S1 (VNG0258H/ROSR-S1)
referenceKutnowski et al. 'Nucleic 47 8860 2019
sourceHalobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
experimentX-ray (resolution=2.00, R-factor=?)
structural superfamily"Winged helix" DNA-binding domain;
reference complex6qil_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureLNHRYPR/LNHRYPR

Estimated binding specificities ?

readout + contactlogo
# IC=14.003 IC/col=0.583 n_of_columns=24 specificity:   
A |  84  84   7  24   0   0   0  24  24  24  24  24  24  24  24  24   4  96   0  96  24   0   7   4
C |   4   4  81  24   0   0   5  24  24  24  24  24  24  24  24  24   4   0  96   0  24  96   4  81
G |   4   4   4  24   0  96   0  24  24  24  24  24  24  24  24  24   4   0   0   0  24   0   4   4
T |   4   4   4  24  96   0  91  24  24  24  24  24  24  24  24  24  84   0   0   0  24   0  81   7
scan!

home
updated Thu Jul 31 00:15:50 2025