| structure name | THE COMPLEX STRUCTURE OF HSROSR-S1 (VNG0258H/ROSR-S1) (DNA binding protein) |
| reference | Kutnowski et al. 'Nucleic 47 8860 2019 |
| source | Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) / Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) |
| experiment | X-ray (resolution=2.00, R-factor=0.209) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Transcriptional regulator PadRlike family; |
| multimeric complexes | 6qfd_AB 6qh0_AB 6qh0_CD 6qil_AB 6qil_CD 6qua_AB 6qua_CD |
| redundant complexes | 6qfd_B
6qh0_A
 6qua_C
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | LNHRYPR |
Estimated binding specificities ?
| contact |  |
A | 8 69 0 24 0 0 1 69 C | 8 8 0 24 0 0 0 8 G | 69 11 96 24 0 96 8 11 T | 11 8 0 24 96 0 87 8scan! |
Dendrogram of similar interfaces ?
matrix format--TT------KATT--QTTG----LTRT----KA--FTYT L +-----------------------------2p7c_B ! ------------------NAST--HT--STLT-------- L ! +------7cby_C +-4 +--1 ----------------NAST--RTHT--ST---------- L ! ! +--------------2 +------3l2c_A ! ! ! ! RT--LANTHGTTET--YTRG-------------------- L +-5 +----3 +---------1f4k_B ! ! ! ----------QCKT----RGAT--RGNT------------ L ! ! +------------------------8smh_F +-6 ! ------------------------YG-------------- ! ! +-----------------------------3eyi_B --7 ! ------SG--PTPG--TT----------------HG---- L ! +-----------------------------7d98_Q ! ------RG----DTVT----STRG----------WT---- L +-----------------------------6lxn_A |
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updated Fri Sep 13 23:09:12 2024