6qwk_AB : 3D-footprint complex

structure name	THE TRANSCRIPTIONAL REGULATOR PRFA-L140F MUTANT FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH A 30-BP OPERATOR PRFA-BOX MOTIF
reference	Sauer-Eriksson et al. J.Bacteriol. 202 ? 2020
source	Listeria monocytogenes
experiment	X-ray (resolution=2.90, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6qwk_A interface=181,183,184,186,187, naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingkfgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln > 6qwk_B interface=181,183,184,186,187, naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingkfgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln
interface signature	HSASR/HSASR

Estimated binding specificities ?

readout + contact

# IC=7.412 IC/col=0.741 n_of_columns=10

specificity:

A |  78  78   0  78  24  24   6   0   0   6
C |   6   6  96   6  24  24   6   0   0   6
G |   6   6   0   6  24  24   6  96   0   6
T |   6   6   0   6  24  24  78   0  96  78

scan!

home
updated Sat Dec 14 18:53:20 2024