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legend  pdf

structure nameCRYOEM STRUCTURE OF THE COMPLETE E. COLI DNA GYRASE COMPLEX BOUND TO A 130 BP DNA DUPLEX
sourceESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12)
experimentNMR
structural superfamilyType II DNA topoisomerase;
reference complex6rks_A 6rks_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureINRKK/K

Estimated binding specificities ?

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# IC=5.752 IC/col=0.164 n_of_columns=35 specificity:   
A |   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24   7  24  24  24  24  24  24  24  24  22  24  24   0  24  24  24  24  18   3
C |  96   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  18  24  24  24  24  24  24  24  24   3  24  24   0  24  24  24  24  28   0
G |   0  96  24  24  24  24  24  24  24  24  24  24  24  24  24  24  22  24  24  24  24  24  24  24  24  53  24  24  96  24  24  24  24  36  93
T |   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  49  24  24  24  24  24  24  24  24  18  24  24   0  24  24  24  24  14   0
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updated Sat Dec 16 17:22:14 2023