| structure name | E. COLI DNA GYRASE - DNA BINDING AND CLEAVAGE DOMAIN IN STATE 1 WITHOUT TOPRIM INSERTION (DNA GYRASE SUBUNIT A) |
| source | ESCHERICHIA COLI K-12 |
| experiment | NMR |
| structural superfamily | Type II DNA topoisomerase; |
| sequence family | DNA gyrase/topoisomerase IV, subunit A; |
| multimeric complexes | 6rks_AB 6rks_CD 6rku_AB 6rku_CD 6rkv_AB 6rkv_CD 6rkw_AB 6rkw_CD 7z9c_AB 7z9c_CD 7z9g_AB 7z9g_CD 7z9k_AB 7z9k_CD 7z9m_AB 7z9m_CD |
| redundant complexes | 6rku_A
 6rkw_A
7z9c_C
7z9g_A
7z9k_C
7z9m_C
6rkv
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format----------------------------IC------------------------ +-6rks_A +-------------4 --------STSA----------RA----IA------------------------ +-----7 +-3rae_A ! ! ----------------------------IA------------------------ ! +---------------4z2c_B +-10 YT--------ST------------RA--IG------------------------ ! ! +5bs8_A ! ! +----------------2 ----------AG----------RT--ECIGAG---------------------- ! ! ! +3qx3_B ! +----8 YC--------SA----------RG----IC------------------------ L ! ! +---4z4q_B ! +------------5 YA------SGAA----------------IC----RA------------------ L +----11 +---6waa_D ! ! YC--------SG----------RT----IG------------------------ ! ! +5iwi_C ! ! +-1 ----------SA----------RG----IG--QT-------------------- L ! ! +------------3 +5npk_d ! ! ! ! ----RC----AT----------------IC----RG------------------ L +-12 ! +----6 +2xkk_C ! ! ! ! ! ----------SA--------------EGIGSC---------------------- ! ! +---9 +-------------3l4j_A ! ! ! --DC----------------------ECIGSG---------------------- L +-13 ! +------------------4fm9_A ! ! ! --------------------------------------NTATAT--STRG---- L ! ! +----------------------------1dh3_C +-14 ! ------------NGSARGHGSC-------------------------------- L ! ! +-----------------------------6el8_A +-15 ! ------------NASTRGHTST-------------------------------- L ! ! +-----------------------------6nce_A +-16 ! --------------------------------------NTATAT----RG---- L ! ! +-----------------------------5t01_B +-17 ! ----------------RGHTST-------------------------------- L ! ! +-----------------------------6akp_C +-18 ! ------RCQG--------------SG---------------------------- ! ! +-----------------------------4qlc_U +-19 ! --------RGRGYC---------------------------------------- L ! ! +-----------------------------1cf7_A -20 ! ----------------------------------------NTRTATAT--CTRA L ! +-----------------------------5vpe_D ! ------------------------------------RCNCAAAT--CTRC---- L +-----------------------------2wt7_A |
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updated Tue Dec 19 14:38:14 2023