6ryl_ABC : 3D-footprint complex

structure name	WUS-HD BOUND TO TAAT DNA
reference	Sloan et al. 'Nat 11 2223 2020
source	Arabidopsis thaliana
experiment	X-ray (resolution=2.63, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	6ryd_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6ryl_A interface=48,51,52,56, wtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkaRerqkk > 6ryl_B interface=2,50,54,57,58,60, tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfqNhkAReRqkkr > 6ryl_C interface=2,50,53,54, tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkarerqkkr
interface signature	YQNR/RYNARR/RYQN

Estimated binding specificities ?

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# IC=12.505 IC/col=0.893 n_of_columns=14

specificity:

A |   2   2   0   0   0  96  88  24  10   0   0   0  20   2
C |   0  32   0   0   0   0   4  24  14   1   2   0   6  10
G |  22   4  96   0   0   0   2  24  60   2  92   0  10  75
T |  72  58   0  96  96   0   2  24  12  93   2  96  60   9

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updated Tue Sep 10 20:16:20 2024