6ryl_ABC : 3D-footprint complex

structure name	WUS-HD BOUND TO TAAT DNA
reference	Sloan et al. 'Nat 11 2223 2020
source	Arabidopsis thaliana
experiment	X-ray (resolution=2.63, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	6ryd_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6ryl_A interface=48,51,52,56, wtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkaRerqkk > 6ryl_B interface=2,50,54,57,58,60, tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfqNhkAReRqkkr > 6ryl_C interface=2,50,53,54, tRwtptteqikilkelyynnairsptadqiqkitarlrqfgkiegknvfYwfQNhkarerqkkr
interface signature	YQNR/RYNARR/RYQN

Estimated binding specificities ?

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# IC=12.841 IC/col=0.917 n_of_columns=14

specificity:

A |   0   4   0   0   0  96  92  24  14   1   0   0  20   2
C |   2  45   0   0   0   0   2  24  14   0   0   0   4   9
G |  21   2  96   0   0   0   2  24  56   2  96   0  12  78
T |  73  45   0  96  96   0   0  24  12  93   0  96  60   7

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updated Thu Jul 31 01:30:37 2025